Statistical population genomics  [electronic resource] / 
Edited by Julien Y. Dutheil. 
 - New York :  Humana Press,  2020. 
 - 1 online resource. 
 - Methods in Molecular Biology .
<br/><br/> Includes bibliographical references and index. 
<br/><br/>Part I: Essential Concepts1. A Population Genomics LexiconGustavo Valadores Barroso, Ana Filipa Moutinho, and Julien Y Dutheil Part II: Statistical Methods for Analyzing Genomes in Populations2. Processing and Analyzing Multiple Genomes Alignments with MafFilterJulien Y Dutheil 3. Data Management and Summary Statistics with PLINKChristopher C Chang 4. Exploring Population Structure with Admixture Models and Principal Components AnalysisChi-Chun Liu, Suyash Shringapure, Kenneth Lange, and John Novembre 5. Detecting Positive Selection in Populations using Genetic DataAggelos Koropoulis, Nikolaos Alachiotis, and Pavlos Pavlidis 6. polyDFE: Inferring the Distribution of Fitness Effects and Properties of Beneficial Mutations from Polymorphism DataPaula Tataru and Thomas Bataillon 7. MSMC and MSMC2: The Multiple Sequentially Markovian CoalescentStephan Schiffels and Ke Wang 8. Ancestral Population Genomics with Jocx, A Coalescent Hidden Markov ModelJade Yu Cheng and Thomas Mailund 9. Coalescent Simulation with sprimeJerome Kelleher and Konrad Lohse 10. Inference of Ancestral Recombination Graphs using ARGweaverMelissa Hubisz and Adam Siepel Part III: Advances in Population Genomics 11. Population Genomics of Transitions to Selfing in Brassicaceae Model Systems Tiina M. Mattila, Benjamin Laenen, and Tanja Slotte 12. Genomics of Long- and Short- Term Adaptation in Maize and Teosinte Anne Lorant, Jeffrey Ross-Ibarra, and Maud Tenaillon 13. Neurospora from Natural Populations: Population Genomics Insights Into the Life History of a Model Microbial EukaryotePierre Gladieux, Fabien De Bellis, Christopher Hann-Soden, Jesper Svedberg, Hanna Johannesson, and John W Taylor 14. Population Genomics of Fungal Plant Pathogens and the Analyses of Rapidly Evolving Genome Compartments Christoph J. Eschenbrenner, Alice Feurtey, and Eva H. Stukenbrock 15. Population Genomics on the Fly: Recent Advances in DrosophilaAnnabelle Haudry, Stefan Laurent, and Martin Kapun 16. Genomic Access to the Diversity of FishesArne W. Nolte 17. Avian Population Genomics Taking Off: Latest Findings and Future Prospects Kira E. Delmore and Miriam Liedvogel 18. Population Genomics of the House Mouse and the Brown RatKristian K Ullrich and Diethard Tautz 19. Population Genomics in the Great ApesDavid Castellano and Kasper Munch. 
<br/><br/> This open access volume presents state-of-the-art inference methods in population genomics, focusing on data analysis based on rigorous statistical techniques. 
<br/><br/><label>ISBN: </label>978-1-0716-0198-3 
<br/><br/><label>ISSN: </label>1064-3745 
<br/><br/><label>Subjects--Topical Terms: </label><br/>Metagenomics--Statistical methods--Laboratory manuals.